Shane Doran
Co-op Student

Contact information
University of Victoria, Canada
Co-operative Education Student
Department of Biochemistry
Michigan State University
East Lansing, MI 48824-1319
shane_doran@hotmail.com








Research Project

As a Bioinformatics Specialist, my goal is to store the large quantity of data retrieved from microarray experiments conducted in the laboratory. More specifically, my role is to design and implement a microarray subsystem. Due to an increase in microarray research there has been an exponential expansion of microarray data. A single microarray experiment creates several megabytes of data, so efficient storage and recovery is important. To handle all this information, the field of Bioinformatics has evolved to rely heavily upon the use of computers. The goal of the Bioinformatics group is to enable both efficient data retrieval and analysis for all members of the lab. The Oracle database dbZach, which I help maintain, was created to store the lab's experimental data.

Another of my goals is to automate the preliminary processing and analysis of the raw microarray data through the use of the Perl programming language. The main purpose of automating this process is to both eliminate human error and biases into the processing of the raw data and to increase efficiency of the analysis.
Another important aspect of my job in the laboratory is the preparation of clones for printing onto microarrays.