Gene or Protein Name EMBL Acc EPD ID Species Position Relative to Start Site Strand Sequence 5'-3' Matrix Similarity Score Histone H1 X06128 33001 Cairina moschata (muscovy duck) -197 (-) cgcagcggcgtggaaaaga 0.625 Histone H1 X06128 33001 Cairina moschata (muscovy duck) -148 (-) caaaaaagcgtgttttttc 0.757 Histone H3_L X14732 33027 Cairina moschata (muscovy duck) -2522 (+) acgcgcggcgtgctcaagg 0.622 Histone H3_L X14732 33027 Cairina moschata (muscovy duck) -2466 (-) gcgcttggcgtgctcggtg 0.721 Histone H3_L X14732 33027 Cairina moschata (muscovy duck) -1697 (-) cgctgaggcgtgccgcttc 0.745 Histone H3_L X14732 33027 Cairina moschata (muscovy duck) -1271 (+) gcgcttggcgtggatggcg 0.76 Histone H3_L X14732 33027 Cairina moschata (muscovy duck) -1035 (-) acgggcggcgtgaagaagc 0.746 Histone H3_L X14732 33027 Cairina moschata (muscovy duck) -89 (-) aagcgatgcgtgtaattgg 0.676 Histone H3_R X14732 33028 Cairina moschata (muscovy duck) -2506 (+) acgcgcggcgtgctcaagg 0.622 Histone H3_R X14732 33028 Cairina moschata (muscovy duck) -2450 (-) gcgcttggcgtgctcggtg 0.721 Histone H3_R X14732 33028 Cairina moschata (muscovy duck) -1678 (-) cgctgaggcgtgccgcttc 0.745 Histone H3_R X14732 33028 Cairina moschata (muscovy duck) -1252 (+) gcgcttggcgtggatggcg 0.76 Histone H3_R X14732 33028 Cairina moschata (muscovy duck) -1016 (-) acgggcggcgtgaagaagc 0.746 Histone H3_R X14732 33028 Cairina moschata (muscovy duck) -801 (+) aagcgatgcgtgtaattgg 0.676 Histone H1-a 11L M17019 27002 Gallus gallus (chicken) -170 (+) agaaacggcgtgccgcgac 0.772 Histone H1-a' 11R M17020 27003 Gallus gallus (chicken) -196 (-) tgagggagcgtgcaggggt 0.648 Histone H1-a' 11R M17020 27003 Gallus gallus (chicken) -66 (+) cggggcggcgtgcaccaat 0.617 Histone H1-b 03 M17021 27004 Gallus gallus (chicken) -52 (-) gcgccgcgcgtgctgattg 0.695 Histone H1-d 02 X01752 11065 Gallus gallus (chicken) -246 (+) tcaggacgcgtgtctgcgg 0.682 Histone H2A-F X13894 33018 Gallus gallus (chicken) -167 (-) gcgggaggcgtggcctgcg 0.708 Histone H2A-F X13894 33018 Gallus gallus (chicken) -130 (+) agcctctgcgtgccgtgtg 0.67 Histone H2A-II J00864 33017 Gallus gallus (chicken) -630 (+) cgagaccgcgtgcttggcc 0.852 Histone H2A-II J00864 33017 Gallus gallus (chicken) -148 (-) aggaaaggcgtgttctcga 0.665 Histone H2B (pKR1a-1.3) X05094 24013 Gallus gallus (chicken) -395 (-) accggcggcgtgcgcagcc 0.78 Histone H2B (pRR2e-3.5) J00864 33016 Gallus gallus (chicken) -386 (-) gtgggccgcgtgcaccggc 0.81 Histone H2B (pRR2e-3.5) J00864 33016 Gallus gallus (chicken) -105 (+) aggaaaggcgtgttctcga 0.665 Histone H5 X00169 11067 Gallus gallus (chicken) -2942 (+) ggcacgagcgtgcgcgatg 0.658 Histone H5 X00169 11067 Gallus gallus (chicken) -2427 (+) gccttgggcgtgccatcgg 0.701 Histone H5 X00169 11067 Gallus gallus (chicken) -1535 (-) ctctcgtgcgtgaatcctg 0.667 Histone H5 X00169 11067 Gallus gallus (chicken) -1235 (+) tgagcccgcgtgctgctgg 0.638 Histone H5 X00169 11067 Gallus gallus (chicken) -1147 (-) agctgttgcgtggctgcct 0.79 Histone H5 X00169 11067 Gallus gallus (chicken) -1086 (-) ggcctctgcgtgacacctt 0.722 Histone H5 X00169 11067 Gallus gallus (chicken) -981 (-) atccgacgcgtgctgagca 0.694 Histone H5 X00169 11067 Gallus gallus (chicken) -816 (+) ggcagctgcgtgcttactc 0.828 Histone H5 X00169 11067 Gallus gallus (chicken) -762 (+) agctctggcgtgtcccaaa 0.67 Histone H5 X00169 11067 Gallus gallus (chicken) -27 (+) cttaaatgcgtgctggtgg 0.67 Histone H5 X00169 11067 Gallus gallus (chicken) -15 (-) cggccgcgcgtgccaccag 0.692 Histone H1a X06757 30042 Homo sapiens (Human) -330 (-) gttagtagcgtgtcgcgat 0.718 Histone H2B X00088 11070 Homo sapiens (Human) -10 (-) aaaaacagcgtgagcaggg 0.669 Histone H3.3 X05854 15024 Homo sapiens (Human) -47 (+) cggggcggcgtgtgttggg 0.665 Histone H3-5B X00090 11073 Homo sapiens (Human) 78 (-) gctgcttgcgtggcgcttt 0.732 Testicular histone H1 M60094 49001 Homo sapiens (Human) -416 (+) aatcatggcgtgaataatt 0.733 Histone H1-0 U18295 49009 Mus musculus (mouse) -462 (+) cagggccgcgtgtgttagt 0.677 Histone H1-A Y12290 48017 Mus musculus (mouse) -713 (-) caaaaatgcgtgaaagtat 0.689 Histone H1-E L26163 48019 Mus musculus (mouse) 45 (-) tggcgaagcgtgtgaggag 0.652 Histone H2A 291A X05862 23007 Mus musculus (mouse) -722 (-) tgcacatgcgtggttattg 0.643 Histone H2A 291A X05862 23007 Mus musculus (mouse) -588 (+) cgacaccgcgtgcttggcc 0.844 Histone H2A(A)-613 U62673 49005 Mus musculus (mouse) -613 (+) cgacacggcgtgcttggcc 0.812 Histone H2B 221 X05864 11069 Mus musculus (mouse) -540 (+) tgttgtagcgtggcagtac 0.812 Histone H2B 291B X05863 23009 Mus musculus (mouse) -556 (-) ctgggccgcgtgaccatcg 0.717 Histone H2B 291B X05863 23009 Mus musculus (mouse) -385 (-) tcggagcgcgtgggcgccg 0.733 Histone H2B 291B X05863 23009 Mus musculus (mouse) -346 (-) gtgggccgcgtgcaccggc 0.81 Histone H2B 291B X05863 23009 Mus musculus (mouse) -43 (+) cataacagcgtgtatatag 0.648 Histone H2B-143 X80328 49007 Mus musculus (mouse) -1617 (-) acgccaagcgtgtcaccat 0.635 Histone H2B-143 X80328 49007 Mus musculus (mouse) -1609 (+) acgcttggcgtggatggcg 0.726 Histone H2B-143 X80328 49007 Mus musculus (mouse) -1373 (-) accggcggcgtgaagaagc 0.736 Histone H2B-143 X80328 49007 Mus musculus (mouse) -507 (-) ctgggccgcgtgaccatcg 0.717 Histone H2B291A X05862 23008 Mus musculus (mouse) -561 (-) ctgggccgcgtgaccatcg 0.717 Histone H2B291A X05862 23008 Mus musculus (mouse) -390 (-) tcggagcgcgtgggcgccg 0.733 Histone H2B291A X05862 23008 Mus musculus (mouse) -351 (-) gtgggccgcgtgcaccggc 0.81 Histone H3.1-221 M32460 49015 Mus musculus (mouse) -117 (-) ctgataggcgtgtctgctt 0.644 Histone H3.1-221 M32460 49015 Mus musculus (mouse) -55 (+) gtgttgcgcgtgtgcgacg 0.723 Histone H3.1-A X01684 11071 Mus musculus (mouse) -117 (-) ctgataggcgtgtctgctt 0.644 Histone H3.1-A X01684 11071 Mus musculus (mouse) -55 (+) gtgttgcgcgtgtgcgacg 0.723 Histone H3.2-614 M32461 49016 Mus musculus (mouse) -152 (+) tcaggtggcgtggcgggcc 0.831 Histone H3.2-615 U62674 49003 Mus musculus (mouse) -1520 (-) ttcatttgcgtgcggccgt 0.705 Histone H3.2-615 U62674 49003 Mus musculus (mouse) -1499 (-) acgacgcgcgtgctcggtg 0.663 Histone H3.2-615 U62674 49003 Mus musculus (mouse) -1389 (+) tcaggacgcgtgtgagcca 0.705 Histone H3.2-615 U62674 49003 Mus musculus (mouse) -1184 (+) cggtggggcgtgtacaccg 0.682 Histone H3.2-615 U62674 49003 Mus musculus (mouse) -1145 (+) acgcggagcgtgtgggcgc 0.758 Histone H3.2-615 U62674 49003 Mus musculus (mouse) -149 (+) tcaggtggcgtggcgggcc 0.831 Histone H3.2-616 U62675 49004 Mus musculus (mouse) -258 (+) gcacactgcgtgagaaaca 0.764 Histone H3.2-E X80328 48009 Mus musculus (mouse) -1613 (+) cgacacggcgtgcttggcc 0.812 Histone H3.2-E X80328 48009 Mus musculus (mouse) -746 (+) ctgggccgcgtgaccatcg 0.717 Histone H3.2-F U62669 48010 Mus musculus (mouse) -1911 (+) cgacacggcgtgcttggcc 0.812 Histone H3.2-F U62669 48010 Mus musculus (mouse) -1211 (+) gtgggccgcgtgcaccggc 0.81 Histone H3.2-F U62669 48010 Mus musculus (mouse) -1172 (+) tcggagcgcgtgggcgccg 0.733 Histone H3.2-F U62669 48010 Mus musculus (mouse) -1001 (+) ctgggccgcgtgaccatcg 0.717 Histone H3.2-F U62669 48010 Mus musculus (mouse) -456 (+) gtaaaacgcgtgtttaaaa 0.706 Testicular histone H1 X72805 49013 Mus musculus (mouse) -202 (+) aaaagtcgcgtggaatcta 0.728 Testicular histone H1 X72805 49013 Mus musculus (mouse) -15 (-) agtgggggcgtgcgggggg 0.664 Histone H2A testis X01064 7049 Salmo gairdneri (rainbow trout) -710 (+) acgccgagcgtgtgggcgc 0.743 Histone H2A testis X01064 7049 Salmo gairdneri (rainbow trout) -334 (+) ctatttggcgtgtttgtta 0.675 Histone H1 Z71502 49008 Xenopus laevis (African clawed toad) -844 (-) tttacttgcgtggcgctgc 0.795