Gene or Protein Name EMBL Acc EPD ID Species Position Relative to Start Site Strand Sequence 5'-3' Matrix Similarity Score Small nuclear ribonucleoprotein E M21253 41008 Homo sapiens (Human) -527 (-) attacaggcgtgacaccgc 0.751 Small nuclear ribonucleoprotein E M21253 41008 Homo sapiens (Human) -40 (+) tgccgccgcgtgaccttca 0.704 Small nuclear ribonucleoprotein E M21253 41008 Homo sapiens (Human) 18 (+) agaggcagcgtgcgggtgt 0.642 Small nuclear RNA U1 18-5 X12936 24011 Rattus norvegicus (Norway rat) -156 (+) gtgtaccgcgtgacaggcg 0.811 Small nuclear RNA U1 18-5 X12936 24011 Rattus norvegicus (Norway rat) -147 (+) gtgacaggcgtgtgatttc 0.773 Small nuclear RNA U1 18-5 X12936 24011 Rattus norvegicus (Norway rat) -99 (+) tgggggggcgtgagaccga 0.687 Small nuclear RNA U1 18-5 X12936 24011 Rattus norvegicus (Norway rat) -46 (+) taggagtgcgtgtgggtgg 0.709 Small nuclear RNA U1 18-5 X12936 24011 Rattus norvegicus (Norway rat) -31 (+) gtggagggcgtgctggctg 0.721 Small nuclear RNA U1 52a X01091 17025 Gallus gallus (chicken) -431 (-) gcgctgcgcgtgccgcccc 0.853 Small nuclear RNA U1 52a X01091 17025 Gallus gallus (chicken) -281 (+) gaaaagggcgtgctaaaga 0.712 Small nuclear RNA U1 52a X01091 17025 Gallus gallus (chicken) -132 (+) accttcggcgtggagtacg 0.621 Small nuclear RNA U1 52a X01091 17025 Gallus gallus (chicken) -39 (+) tggcggggcgtggggagcg 0.682 Small nuclear RNA U1 52b X01092 17026 Gallus gallus (chicken) -250 (+) cgggggggcgtggccatgc 0.765 Small nuclear RNA U1 52b X01092 17026 Gallus gallus (chicken) -161 (+) ggaacccgcgtggacagcc 0.809 Small nuclear RNA U1 52b X01092 17026 Gallus gallus (chicken) -140 (+) gggcagcgcgtgggctgcg 0.776 Small nuclear RNA U1 52b X01092 17026 Gallus gallus (chicken) -128 (+) ggctgcggcgtggggatcc 0.805 Small nuclear RNA U1 52b X01092 17026 Gallus gallus (chicken) -39 (+) tgtcggggcgtggggagcg 0.668 Small nuclear RNA U1 6-6(A) X12931 23016 Rattus norvegicus (Norway rat) -595 (+) acggatggcgtgtggtcta 0.736 Small nuclear RNA U1 6-6(A) X12931 23016 Rattus norvegicus (Norway rat) -238 (+) gtcctgggcgtggcctatg 0.644 Small nuclear RNA U1 6-6(B) X12932 23017 Rattus norvegicus (Norway rat) -238 (+) gtcctgggcgtggcctatg 0.644 Small nuclear RNA U1a M14121 17028 Mus musculus (mouse) -17 (-) atgagttgcgtggccacgg 0.736 Small nuclear RNA U1b X01093 17027 Gallus gallus (chicken) -326 (+) caccgcagcgtgagccgaa 0.62 Small nuclear RNA U1b X01093 17027 Gallus gallus (chicken) -288 (+) ggggggggcgtggccatgc 0.806 Small nuclear RNA U1b X01093 17027 Gallus gallus (chicken) -39 (+) tggcggagcgtggggagcg 0.682 Small nuclear RNA U1b Y00131 17029 Mus musculus (mouse) -233 (+) ggtatgggcgtggtgtatg 0.637 Small nuclear RNA U1b2 X02585 26022 Xenopus laevis (African clawed toad) -225 (+) gtggaacgcgtgcagcctc 0.841 Small nuclear RNA U2 M12856 17033 Gallus gallus (chicken) -196 (-) cggtgcagcgtgccggagc 0.758 Small nuclear RNA U2 M12856 17033 Gallus gallus (chicken) -45 (+) ggggcgcgcgtgggggtgg 0.708 Small nuclear RNA U2 U57614 17036 Homo sapiens (Human) -253 (-) acagagggcgtggcctccg 0.7 Small nuclear RNA U2 K00027 17034 Mus musculus (mouse) -95 (+) gtcgggcgcgtgtttgcgg 0.725 Small nuclear RNA U2 K00027 17034 Mus musculus (mouse) -27 (+) gtatggggcgtgtgggcgc 0.783 Small nuclear RNA U2 K00034 17035 Rattus norvegicus (Norway rat) -262 (-) gcgaggggcgtggcgacac 0.789 Small nuclear RNA U2 K00034 17035 Rattus norvegicus (Norway rat) -222 (+) cagagtcgcgtgcgcgcgc 0.847 Small nuclear RNA U2 K00034 17035 Rattus norvegicus (Norway rat) -24 (+) cttggctgcgtgctgggtg 0.654 Small nuclear RNA U2 X00093 17032 Xenopus laevis (African clawed toad) -2357 (-) ggtcgatgcgtggagtgga 0.683 Small nuclear RNA U2 X00093 17032 Xenopus laevis (African clawed toad) -1526 (-) ggtcgatgcgtggagtgga 0.683 Small nuclear RNA U2 X00093 17032 Xenopus laevis (African clawed toad) -695 (-) ggtcgatgcgtggagtgga 0.683 Small nuclear RNA U3A' X02722 17037 Rattus norvegicus (Norway rat) -42 (+) ggctgccgcgtgtgacgtc 0.826 Small nuclear RNA U4B M14136 17040 Gallus gallus (chicken) -692 (+) gaggggcgcgtgggagcgc 0.851 Small nuclear RNA U4B M14136 17040 Gallus gallus (chicken) -242 (+) gtttcccgcgtgacgtcac 0.8 Small nuclear RNA U4B M14136 17040 Gallus gallus (chicken) -38 (+) ccccggggcgtggggtggc 0.732 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -2971 (-) cagggtggcgtgcactcgc 0.814 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -2683 (+) cttggctgcgtgtctgctt 0.68 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -2388 (-) cagggtggcgtgcactcgc 0.814 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -2100 (+) cttggctgcgtgtctgctt 0.68 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -1805 (-) cagggtggcgtgcactcgc 0.814 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -1517 (+) cttggctgcgtgtctgctt 0.68 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -1222 (-) cagggtggcgtgcactcgc 0.814 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -934 (+) cttggctgcgtgtctgctt 0.68 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -639 (-) cagggtggcgtgcactcgc 0.814 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -351 (+) cttggctgcgtgtctgctt 0.68 Small nuclear RNA U5 X06020 17042 Xenopus laevis (African clawed toad) -56 (-) cagggtggcgtgcactcgc 0.814