Species DRE Summary

Table 1A

Organism summary of the dioxin response element (DRE) core sequence
5’-GCGTG-3’ found in vertebrate promoters in the Eukaryotic Promoter Database

 

Species
# DREs Located
# Promoters
Represented
Anas platyrhynchos (mallard, domestic duck)

3

1

Aotus trivirgatus (douroucouli)

2

1

Bos taurus (cattle)

7

6

Cairina moschata (muscovy duck)

19

5

Coturnix coturnix (quail)

2

1

Cricetulus griseus (Chinese hamster)

3

1

Cricetus cricetus (Chinese hamster)

7

1

Equus caballus (horse)

1

1

Gallus gallus (chicken)

100

37

Halichoerus grypus (grey seal)

1

1

Homo sapiens (human)

289

123

Macaca cynomolgus (macaque)

2

1

Mesocricetus auratus (golden hamster)

9

4

Mus musculus (house mouse)

152

76

Oryctolagus cuniculus (rabbit)

6

5

Ovis aries (sheep)

5

4

Pan troglodytes (chimpanzee)

5

2

Papio anubis (olive baboon)

1

1

Rattus norvegicus (Norway rat)

118

55

Salmo gairdneri (rainbow trout)

3

2

Sus scrofa (pig)

15

7

Xenopus laevis (African clawed toad)

28

13

Vertebrate Total
778
348

 
Table 1B

Organism summary of the dioxin response element (DRE) core sequence
5’-GCGTG-3’ found in invertebrate promoters in the
Eukaryotic Promoter Database.

 

Species
# DREs Located
# Promoters
Represented
Arthropod
Autographa californica nuclear polyhedrosis virus

9

4

Bombyx mori (silkworm)

2

2

Chironomus thummi (midge)

6

4

Drosophila funebris (fruit fly)

2

1

Drosophila mauritiana (fruit fly)

2

1

Drosophila melanogaster (fruit fly)

113

50

Drosophila mojavensis (fruit fly)

9

2

Drosophila mulleri (fruit fly)

9

2

Drosophila orena (fruit fly)

3

2

Drosophila pseudoobscura (fruit fly)

1

1

Drosophila sechellia (fruit fly)

7

4

Locusta migratoria (migratory locust)

2

1

Echinoderm
Lytechinus pictus (painted urchin)

11

3

Lytechinus variegatus (green urchin)

1

1

Paracentrotus lividus (common urchin)

2

2

Psammechinus miliaris (sand urchin)

9

4

Strongylocentrotus droebachiensis

2

2

Strongylocentrotus purpuratus

11

7

Mollusc
Aplysia californica (California sea hare)

2

2

Nematode
Caenorhabditis elegans (Roundworm)

34

12

Invertebrate Total
237
107

 

Table 1C


Organism summary of the dioxin response element (DRE) core sequence
5’-GCGTG-3’ found in viral promoters in the Eukaryotic Promoter Database

 
Species
# DREs Located
# Promoters
Represented
Adenovirus
Human adenovirus type 12

10

4

Human adenovirus type 2

36

9

Human adenovirus type 5

19

5

Human adenovirus type 7

12

5

Simian adenovirus (7P)

3

1

Epstein-Barr virus
Human herpesvirus 4

154

22

Hepadnavirus    
Duck hepatitis B virus

6

2

Human hepatitis B virus

4

4

Herpes virus
Human cytomegalovirus

102

10

Human herpes simplex virus type 1

345

30

Human herpes simplex virus type 2

38

8

Murine cytomegalovirus

1

1

Papilloma virus
Bovine papillomavirus type 1

15

6

Human Papillomavirus type 16

3

1

Human Papillomavirus type 18

9

2

Papovavirus
Mouse polyoma virus

1

1

Simian virus 40

5

3

Parvovirus
(Murine) parvovirus H1

4

2

Adeno-associated virus 2

9

3

Lentivirus Oncovirus
Human immunodeficiency virus type 1

1

1

Human immunodeficiency virus type 2

2

1

Simian AIDS retrovirus SRV-1

3

1

Mammalian Oncovirus
(Avian) Rous sarcoma virus

7

1

Bovine leukemia virus

1

1

Gibbon ape leukemia virus

1

1

Human T-cell leukemia virus type I

4

1

Xenotropic murine leukemia virus

3

1
Viral Total 798 127
EPD TOTAL
1813
582

 

Back to the Supplementary Data page