A. Daniel Jones Recent Publications
Zou W, Beggs KM, Sparkenbaugh EM, Jones AD, Younis HS, Roth RA, Ganey PE. 2009. Sulindac metabolism and synergy with tumor necrosis factor-alpha in a drug-inflammation interaction model of idiosyncratic liver injury. J Pharmacol Exp Ther. 331(1):114-21.
AJK Koo, XL Gao, AD Jones, GA Howe. 2009. A rapid wound signal activates the systemic synthesis of bioactive jasmonates in Arabidopsis. Plant Journal. 59:974-986.
Dekeyser JG, Stagliano MC, Auerbach SS, Prabhu KS, Jones AD, Omiecinski CJ. (2009) Di(2-ethylhexyl) phthalate is a highly potent agonist for the human constitutive androstane receptor splice variant, CAR2. Mol Pharmacol. 75(5):1005-13.
Kahlon DK, Lansdell TA, Fisk JS, Hupp CD, Friebe TL, Hovde S, Jones AD, Dyer RD, Henry RW, Tepe JJ. (2009) Nuclear Factor-kappaB Mediated Inhibition of Cytokine Production by Imidazoline Scaffolds. J Med Chem. Feb 16. Epub ahead of print.
Butler PJ, Dong C, Snyder AJ, Jones AD, Sheets ED. (2008) Bioengineering and Bioinformatics Summer Institutes: meeting modern challenges in undergraduate summer research. CBE Life Sci Educ. Spring;7(1):45-53.
Kalcic CL, Gunaratne TC, Jones AD, Dantus M, Reid GE. (2009) Femtosecond laser-induced ionization/dissociation of protonated peptides. J Am Chem Soc. 131(3):940-2.
Mansfield MA, Jones AD, Kuldau GA. (2008) Contamination of fresh and ensiled maize by multiple penicillium mycotoxins. Phytopathology. 98(3):330-6.
Chung HS, Koo AJ, Gao X, Jayanty S, Thines B, Jones AD, Howe GA. (2008) Regulation and function of Arabidopsis JAZ genes in response to wounding and herbivory. Plant Physiol. 146(3):952-64.
Balan V, da Costa Sousa L, Chundawat SP, Vismeh R, Jones AD, Dale BE. (2008) Mushroom spent straw: a potential substrate for an ethanol-based biorefinery. J Ind Microbiol Biotechnol. 35(5):293-301.
Mansfield MA, Archibald DD, Jones AD, Kuldau GA. (2007) Relationship of sphinganine analog mycotoxin contamination in maize silage to seasonal weather conditions and to agronomic and ensiling practices. Phytopathology. 97(4):504-11.
Martin AN, Farquar GR, Jones AD, Frank M. (2007) The non-destructive identification of solid over-the-counter medications using single particle aerosol mass spectrometry, Rapid Commun. Mass Spectrom., 21: 3561-3568.
Denkenberger KA, Bowers RA, Jones AD, Mueller KT. (2007) NMR studies of the thermal degradation of a perfluoropolyether on the surfaces of gamma-alumina and kaolinite. Langmuir 23(17): 8855-8860.
Lu B, Xu C, Awai K, Jones AD, Benning C. (2007) A small ATPase protein of Arabidopsis, TGD3, involved in chloroplast lipid import. J Biol Chem. 282(49):35945-53.
Gu L, Jones AD, Last RL. (2007) LC-MS/MS Assay for Protein Amino Acids and Metabolically Related Compounds for Large-Scale Screening of Metabolic Phenotypes. Anal Chem. 79(21):8067-75.
Kuldau, G., Mansfield, M., Archibald, D., and A. D. Jones (2007). Relationship of sphinganine analog mycotoxin contamination in maize silage to seasonal weather conditions, and agronomic and ensiling practices. Phytopathology, 94: 505-511.
Last, R. L., Jones, A. D., and Y. Shachar-Hill (2007). Towards the plant metabolome and beyond. Nature Reviews Molecular Cell Biology, 8: 167-174.
Ishmael, S. S., Ishmael, F. T., Jones, A. D., and J. S. Bond (2006). Protease domain glycans affect oligomerization, disulfide bond formation, and stability of the meprin A metalloprotease homo-oligomer. J. Biol. Chem., 281: 37404-37415.
Wang, Y., Scherperel, G., Roberts, K. D., Jones, A. D., Reid, G. E., and H. Yan (2006). A point mutation converts dihydroneopterin aldolase to a cofactor-independent oxygenase. J. Am. Chem. Soc., 128: 13216-13223.
Chen, H., Jones, A. D., and G. A. Howe (2006). Constitutive activation of the jasmonate signaling pathway enhances the production of secondary metabolites in tomato. FEBS Letters, 580: 2540-2546.
Manda, K., Hammer, E., Mikolasch, A., Niedermayer, T., Dec, J., Jones, A. D., Benesi, A. J., Schauer, F., and J.-M. Bollag. (2005). Laccase-induced cross-coupling of 4-aminobenzoic acid with 2,5-dihydroxy-N-(2-hydroxyethyl)benzamide and 2,5-dihydroxybenzoic acid methyl ester. J. Mol. Catal. B: Enzymatic, 35: 86-92.
Lame'. M.W. , Jones, A.D., Wilson, D.W., and H. J. Segall. (2005) Monocrotaline pyrrole targets proteins with and without cysteine residues in the cytosol and membranes of human pulmonary artery endothelial cells. Proteomics 5: 4398-4413.
Boddu, J. , Svabek C., Ibraheem, F., Jones, A. D., and S. Chopra. (2005) Characterization of a deletion allele of a sorghum Myb gene yellow seed1 showing loss of 3-deoxyflavonoids. Plant Sci. 169:542-552.
Bell, D.S., Cramer, H. M., and A. D. Jones. (2005) Rational method development strategies on a fluorinated stationary phase: mobile phase ionic concentration and temperature effects on the separation of ephedrine alkaloids. J. Chromatogr. A. 1095: 113-118.
Boddu, J., Svabek, C., Sekhon, R., Gevens, A., Nicholson, R.L., Jones, A.D., Pedersen, J.F., Gustine, D.L., and S. Chopra. (2004) Expression of a putative flavonoid 3'-hydroxylase in sorghum mesocotyls synthesizing 3-deoxyanthocyanidin phytoalexins. Physiol. Molec. Plant Pathol. 65:101-113.
Coleman, C.S., Stanley, B.A., Jones, A.D., and A.E. Pegg.(2004) Spermidine/spermine N1-acetyltransferase-2 (SSAT-2) acetylates thialysine and is not involved in polyamine metabolism. Biochem. J. 384:139-148.
Frigaard, N.-U. , Maresca, J.A., Yunker, C.E., Jones, A.D., and D. A. Bryant(2004) Genetic manipulation of carotenoid biosynthesis in the green sulfur bacterium Chlorobium tepidum. J. Bacteriol. 186:5210-5220.
Repeta, D.J., Hartman, N.T., John, S., Goericke, R., and A. D. Jones. (2004) Structure elucidation and characterization of polychlorinated biphenyl carboxylic acids as major constituents of chromophoric dissolved organic matter in seawater. Environ. Sci. Technol. 38:5373-5378.
Lame', M.W. , Jones, A.D., Wilson, D.W., and H.J. Segall (2003) Protein targets of 1,4-benzoquinone and 1,4-naphthoquinone in human bronchial epithelial cells. Proteomics 3:479-495.
Sakuragi, Y., Zybailov, B., Shen, G., Jones, A. D., Chitnis, P.R., van der Est, A., Bittl, R., Zech, S., Stehlik D., Golbeck, J.H., and D. A. Bryant. (2002) Insertional inactivation of the menG gene, encoding 2-phytyl-1,4-naphthoquinone methyltransferase of Synechocystis sp. PCC 6803, results in the incorporation of 2-phytyl-1,4-naphthoquinone into the A1 Site and alteration of the equilibrium constant between A1 and FX in photosystem I. Biochemistry, 41:94-405.