A. Daniel Jones Recent Publications

Chung HS, Koo AJ, Gao X, Jayanty S, Thines B, Jones AD, Howe GA. Regulation and function of Arabidopsis JAZ genes in response to wounding and herbivory. Plant Physiol. 2008 Jan 25; [Epub ahead of print]

Balan V, da Costa Sousa L, Chundawat SP, Vismeh R, Jones AD, Dale BE. Mushroom spent straw: a potential substrate for an ethanol-based biorefinery. J Ind Microbiol Biotechnol. 2008 Jan 8; [Epub ahead of print]

Martin AN, Farquar GR, Jones AD, Frank M. (2007) The non-destructive identification of solid over-the-counter medications using single particle aerosol mass spectrometry, Rapid Commun. Mass Spectrom., 21: 3561-3568.

Denkenberger KA, Bowers RA, Jones AD, Mueller KT. (2007) NMR studies of the thermal degradation of a perfluoropolyether on the surfaces of gamma-alumina and kaolinite. Langmuir 23(17): 8855-8860.

Lu B, Xu C, Awai K, Jones AD, Benning C. (2007) A small ATPase protein of Arabidopsis, TGD3, involved in chloroplast lipid import. J Biol Chem. Oct 15; [Epub ahead of print]

Gu L, Jones AD, Last RL. (2007) LC-MS/MS Assay for Protein Amino Acids and Metabolically Related Compounds for Large-Scale Screening of Metabolic Phenotypes. Anal Chem. Oct 5; [Epub ahead of print]

Kuldau, G., Mansfield, M., Archibald, D., and A. D. Jones (2007). Relationship of sphinganine analog mycotoxin contamination in maize silage to seasonal weather conditions, and agronomic and ensiling practices. Phytopathology, 94: 505-511.

Last, R. L., Jones, A. D., and Y. Shachar-Hill (2007). Towards the plant metabolome and beyond. Nature Reviews Molecular Cell Biology, 8: 167-174.

Ishmael, S. S., Ishmael, F. T., Jones, A. D., and J. S. Bond (2006). Protease domain glycans affect oligomerization, disulfide bond formation, and stability of the meprin A metalloprotease homo-oligomer. J. Biol. Chem., 281: 37404-37415.

Wang, Y., Scherperel, G., Roberts, K. D., Jones, A. D., Reid, G. E., and H. Yan (2006). A point mutation converts dihydroneopterin aldolase to a cofactor-independent oxygenase. J. Am. Chem. Soc., 128: 13216-13223.

Chen, H., Jones, A. D., and G. A. Howe (2006). Constitutive activation of the jasmonate signaling pathway enhances the production of secondary metabolites in tomato. FEBS Letters, 580: 2540-2546.

Manda, K., Hammer, E., Mikolasch, A., Niedermayer, T., Dec, J., Jones, A. D., Benesi, A. J., Schauer, F., and J.-M. Bollag. (2005). Laccase-induced cross-coupling of 4-aminobenzoic acid with 2,5-dihydroxy-N-(2-hydroxyethyl)benzamide and 2,5-dihydroxybenzoic acid methyl ester. J. Mol. Catal. B: Enzymatic, 35: 86-92.

Lame'. M.W. , Jones, A.D., Wilson, D.W., and H. J. Segall. (2005) Monocrotaline pyrrole targets proteins with and without cysteine residues in the cytosol and membranes of human pulmonary artery endothelial cells. Proteomics 5: 4398-4413.

Boddu, J. , Svabek C., Ibraheem, F., Jones, A. D., and S. Chopra. (2005) Characterization of a deletion allele of a sorghum Myb gene yellow seed1 showing loss of 3-deoxyflavonoids. Plant Sci. 169:542-552.

Bell, D.S., Cramer, H. M., and A. D. Jones. (2005) Rational method development strategies on a fluorinated stationary phase: mobile phase ionic concentration and temperature effects on the separation of ephedrine alkaloids. J. Chromatogr. A. 1095: 113-118.

Boddu, J., Svabek, C., Sekhon, R., Gevens, A., Nicholson, R.L., Jones, A.D., Pedersen, J.F., Gustine, D.L., and S. Chopra. (2004) Expression of a putative flavonoid 3'-hydroxylase in sorghum mesocotyls synthesizing 3-deoxyanthocyanidin phytoalexins. Physiol. Molec. Plant Pathol. 65:101-113.

Coleman, C.S., Stanley, B.A., Jones, A.D., and A.E. Pegg.(2004) Spermidine/spermine N1-acetyltransferase-2 (SSAT-2) acetylates thialysine and is not involved in polyamine metabolism. Biochem. J. 384:139-148.

Frigaard, N.-U. , Maresca, J.A., Yunker, C.E., Jones, A.D., and D. A. Bryant(2004) Genetic manipulation of carotenoid biosynthesis in the green sulfur bacterium Chlorobium tepidum. J. Bacteriol. 186:5210-5220.

Repeta, D.J., Hartman, N.T., John, S., Goericke, R., and A. D. Jones. (2004) Structure elucidation and characterization of polychlorinated biphenyl carboxylic acids as major constituents of chromophoric dissolved organic matter in seawater. Environ. Sci. Technol. 38:5373-5378.

Lame', M.W. , Jones, A.D., Wilson, D.W., and H.J. Segall (2003) Protein targets of 1,4-benzoquinone and 1,4-naphthoquinone in human bronchial epithelial cells. Proteomics 3:479-495.

Sakuragi, Y., Zybailov, B., Shen, G., Jones, A. D., Chitnis, P.R., van der Est, A., Bittl, R., Zech, S., Stehlik D., Golbeck, J.H., and D. A. Bryant. (2002) Insertional inactivation of the menG gene, encoding 2-phytyl-1,4-naphthoquinone methyltransferase of Synechocystis sp. PCC 6803, results in the incorporation of 2-phytyl-1,4-naphthoquinone into the A1 Site and alteration of the equilibrium constant between A1 and FX in photosystem I. Biochemistry, 41:94-405.

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